Welcome to Dendros

Dendros is a Python toolkit for reading and analyzing Galacticus semi-analytic model outputs — both HDF5 model outputs and posterior-sample (“MCMC”) chain logs.

Contents

• Quickstart
  • Installation
  • Opening files
  • Checking completion status
  • Listing outputs
  • Listing properties
  • Reading datasets
  • Filtering
  • Tracing galaxy histories
  • MPI outputs
  • Star formation histories
  • Plotting analyses
• MCMC analysis
  • Opening a run
  • Convergence
  • Mixing diagnostics
  • Maximum posterior, sampling, PCA, and MVN fits
  • Emitting parameter files
  • Corner plots
  • End-to-end example
• API Reference
  • open_outputs()
  • open_models()
  • Collection
  • ModelCollection
  • OutputIndex
  • OutputMeta
  • sfh_collapse_metallicities()
  • sfh_times()
  • trace_galaxy_history()
  • list_analyses()
  • plot_analyses()
  • MCMC
  • Internal helpers

Indices and tables

• Index

• Module Index

• Search Page